STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_08568Uncharacterized protein. (477 aa)    
Predicted Functional Partners:
N307_04237
Uncharacterized protein.
 
 0.998
N307_05283
Uncharacterized protein.
 
 0.997
N307_09852
Negative elongation factor C/D.
  
 0.958
N307_06536
VOC domain-containing protein.
 
 
 0.937
N307_12273
Hydroxysteroid dehydrogenase-like 2.
  
 0.920
N307_12272
Hydroxysteroid dehydrogenase-like 2.
  
 0.920
N307_06846
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 
 0.917
N307_00900
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.902
N307_04761
4-hydroxyphenylpyruvate dioxygenase-like.
  
 
 0.902
N307_05789
Thiolase_N domain-containing protein.
  
 0.900
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.