STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_09232NACHT, LRR and PYD domains-containing protein 3. (752 aa)    
Predicted Functional Partners:
N307_05663
Receptor-interacting serine/threonine-protein kinase 2.
   
 0.793
N307_07745
Suppressor of G2 allele of SKP1.
    
 0.721
N307_01199
DNA-binding protein Rfx5.
    
 0.714
N307_03788
Ribonuclease CL2; Belongs to the pancreatic ribonuclease family.
    
   0.704
N307_08174
Autophagy-related protein 16-1.
    
 0.693
N307_10842
Serine/threonine-protein kinase Nek7; Belongs to the protein kinase superfamily.
    
 0.687
N307_04893
Serine/threonine-protein kinase Nek6; Belongs to the protein kinase superfamily.
    
 0.687
N307_03868
Heat shock protein HSP 90-alpha.
    
 0.680
N307_09677
Apoptosis regulator Bcl-2.
   
 0.673
N307_05847
Proto-oncogene c-Rel.
   
 0.672
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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