STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_03581Platelet-activating factor acetylhydrolase IB subunit beta. (149 aa)    
Predicted Functional Partners:
PAFAH1B1
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family.
    
 0.994
N307_06638
Phospholipase A(2).
     
 0.859
N307_05650
Lysophosphatidylcholine acyltransferase 2.
     
 0.846
N307_02973
Platelet-activating factor acetylhydrolase.
     
 0.846
N307_01302
Lysophosphatidylcholine acyltransferase 1.
     
 0.846
N307_12327
Group XIIA secretory phospholipase A2.
     
 0.845
N307_04582
Group XIIB secretory phospholipase A2-like.
     
 0.844
N307_08132
Phospholipase A(2).
     
 0.844
N307_00981
Phospholipase A(2).
     
 0.839
N307_15252
Phospholipase A(2).
     
 0.838
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.