STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_15114La-related protein 7. (570 aa)    
Predicted Functional Partners:
N307_02428
Cyclin-dependent kinase 9; Belongs to the protein kinase superfamily.
   
 0.957
N307_03158
Cyclin-T2; Belongs to the cyclin family.
   
 0.882
N307_10478
Protein HEXIM1.
    
 
 0.852
N307_14485
Nuclear cap-binding protein subunit 1.
   
 0.736
N307_00765
Nuclease-sensitive element-binding protein 1.
   
 0.735
N307_00941
Squamous cell carcinoma antigen recognized by T-cells 3.
   
 0.727
N307_11391
RNA helicase.
   
 0.726
N307_09821
Histone H2A deubiquitinase MYSM1.
   
 0.699
N307_09733
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.690
N307_14096
Small nuclear ribonucleoprotein Sm D3.
   
 0.689
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.