STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_12006GDP-fucose protein O-fucosyltransferase 2. (387 aa)    
Predicted Functional Partners:
N307_02863
GDP-fucose protein O-fucosyltransferase 1.
     
 0.924
N307_12007
Putative ribonuclease.
 
 
  
 0.789
N307_07918
Spondin-1.
     
 0.681
N307_09591
ADAMTS-like 3.
     
 0.670
N307_06527
Thrombospondin type-1 domain-containing protein 4.
     
 0.621
N307_08679
Spondin-2.
     
 0.617
N307_04282
Thrombospondin-2.
     
 0.589
N307_14499
A disintegrin and metalloproteinase with thrombospondin motifs 6.
     
 0.588
N307_02359
Beta-1,3-glucosyltransferase.
      
 0.573
N307_02607
A disintegrin and metalloproteinase with thrombospondin motifs 8.
     
 0.561
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.