STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_02830Solute carrier family 22 member 13. (519 aa)    
Predicted Functional Partners:
N307_07899
Phospholipase A2.
    
 0.826
N307_13651
Integrator complex subunit 9.
    
 0.660
N307_14241
Integrator complex subunit 1.
    
 0.656
N307_01496
Integrator complex subunit 11.
    
 0.656
N307_00176
Integrator complex subunit 4.
    
 0.655
N307_04981
Integrator complex subunit 3.
    
 0.655
N307_03958
Protein asunder.
    
 0.652
N307_12341
Integrator complex subunit 10.
    
 0.639
N307_08538
SOSS complex subunit B2.
    
  0.608
N307_03770
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.574
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.