STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_00635Retinoschisin. (198 aa)    
Predicted Functional Partners:
N307_05627
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.670
N307_06548
Peroxisome biogenesis factor 10.
    
   0.655
N307_10208
Copper-transporting ATPase 1.
  
 
 0.651
N307_14395
Copper-transporting ATPase 2.
  
 
 0.651
N307_14345
Vitamin K-dependent protein S.
   
  0.625
N307_05313
Uncharacterized protein.
     
 0.616
N307_01263
Apoptosis-inducing factor 2.
   
 
 0.566
N307_08898
Protein-serine/threonine kinase.
  
 0.560
N307_07572
Protein-serine/threonine kinase.
  
 0.560
N307_00664
Protein-serine/threonine kinase.
  
 0.560
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.