STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_14969Tudor and KH domain-containing protein. (268 aa)    
Predicted Functional Partners:
N307_14149
Piwi-like 1; Belongs to the argonaute family.
   
 0.843
N307_03196
Piwi-like 2.
   
 0.836
N307_06346
Staphylococcal nuclease domain-containing protein 1.
   
 0.708
N307_03839
Putative ATP-dependent RNA helicase TDRD9.
    
 0.698
N307_08608
cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily.
    
 0.676
N307_02382
cAMP-dependent protein kinase catalytic subunit PRKX.
    
 0.676
N307_13867
THAP domain-containing protein 1.
    
 0.676
N307_10150
cAMP-dependent protein kinase type II-beta regulatory subunit.
    
 0.660
N307_14254
cAMP-dependent protein kinase type I-beta regulatory subunit.
    
 0.660
N307_12901
cAMP-dependent protein kinase type I-alpha regulatory subunit.
    
 0.660
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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