STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_06950Short coiled-coil protein. (98 aa)    
Predicted Functional Partners:
N307_00153
Fasciculation and elongation protein zeta-2.
   
 
 0.841
N307_06702
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.833
N307_04542
Fasciculation and elongation protein zeta-1.
   
 
 0.796
N307_08791
ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family.
     
 0.529
N307_09106
WW domain-containing adapter protein with coiled-coil.
      
 0.520
N307_00643
MAP7 domain-containing protein 2.
      
 0.519
N307_02064
PQ-loop repeat-containing protein 1.
      
 0.515
N307_15411
Pre-mRNA-splicing factor 38B.
      
 0.514
N307_08507
GTP cyclohydrolase 1.
      
 0.514
N307_08936
Adaptin ear-binding coat-associated protein 1.
      
 0.513
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.