STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_05777Rho guanine nucleotide exchange factor 18. (991 aa)    
Predicted Functional Partners:
N307_00100
Rho-related GTP-binding protein RhoC.
   
 0.952
N307_02745
A-kinase anchor protein 13.
 
  
   0.929
N307_04002
Rho-related GTP-binding protein RhoB.
   
 0.927
N307_11827
InaD-like.
   
 0.865
N307_05464
Band 4.1-like 4B.
     
 0.845
N307_08350
Serine/threonine-protein kinase STK11; Belongs to the protein kinase superfamily.
     
 0.842
N307_15437
Rho-related GTP-binding protein RhoE.
   
 0.831
N307_14557
Multiple PDZ domain protein.
   
 0.792
N307_13551
Rho-related GTP-binding protein RhoF.
   
 0.764
N307_00898
Rho-related GTP-binding protein RhoF.
   
 0.764
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.