STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_15461Inversin. (1100 aa)    
Predicted Functional Partners:
N307_05257
Segment polarity protein dishevelled DVL-3.
    
 0.899
N307_01498
Segment polarity protein dishevelled DVL-1.
    
 0.899
N307_06463
Intraflagellar transport protein 88.
   
 0.766
N307_05847
Proto-oncogene c-Rel.
   
 0.715
N307_07401
Serine/threonine-protein kinase Nek8.
    
 0.709
N307_01779
Nephrocystin-3.
   
 0.677
N307_00888
Intraflagellar transport protein 81.
    
 0.651
N307_09181
Vang-like protein.
    
 0.627
N307_03710
Carbonyl reductase [NADPH] 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.622
N307_09802
Centrosomal protein of 290 kDa.
    
 0.612
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.