STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_00238Thyroid transcription factor 1-associated protein 26. (164 aa)    
Predicted Functional Partners:
N307_00422
Protein LLP.
   
    0.860
N307_06147
Ribonuclease P protein subunit p30.
   
 
  0.658
N307_12101
Ribonuclease P/MRP protein subunit POP5.
   
 
  0.631
N307_14961
Coiled-coil domain-containing protein 58.
   
    0.566
N307_15381
Ribonuclease P protein subunit p25.
   
 
  0.565
N307_05829
Ribonuclease P protein subunit p25-like.
   
 
  0.565
N307_00883
Density-regulated protein; Belongs to the DENR family.
   
    0.549
N307_11789
Hepatocyte nuclear factor 3-alpha.
    
  0.445
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.