STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_08090Ras association domain-containing protein 6. (330 aa)    
Predicted Functional Partners:
N307_12643
Serine/threonine-protein kinase 4.
    
 0.913
N307_10312
Serine/threonine-protein kinase 3.
    
 0.913
N307_10913
Protein salvador 1.
    
 
 0.550
N307_10385
E3 ubiquitin-protein ligase Mdm2.
    
  0.550
N307_09742
Protein Mdm4; Inhibits p53- and p73-mediated cell cycle arrest and apoptosis by binding its transcriptional activation domain. Belongs to the MDM2/MDM4 family.
    
  0.532
N307_00746
F-box/WD repeat-containing protein 11.
    
 0.510
N307_08774
F-box/WD repeat-containing protein 1A.
    
 0.510
N307_15199
Long-chain-fatty-acid--CoA ligase ACSBG2.
   
  0.483
N307_02788
Long-chain-fatty-acid--CoA ligase 6.
    
  0.476
N307_08840
Long-chain-fatty-acid--CoA ligase 5.
    
  0.476
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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