STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_01680Leukocyte surface antigen CD47. (293 aa)    
Predicted Functional Partners:
N307_04923
Signal-regulatory protein beta-1 isoform 3.
   
 0.983
N307_04282
Thrombospondin-2.
   
 
 0.916
N307_11850
Thrombospondin-4.
   
 
 0.845
N307_05757
Cartilage oligomeric matrix protein.
   
 
 0.845
N307_09521
Thrombospondin-3.
   
 
 0.842
N307_12927
Platelet endothelial cell adhesion molecule.
   
 0.639
N307_05421
Integrin beta.
   
 0.628
N307_10673
Lymphocyte activation 3.
    
 0.614
N307_10674
T-cell surface glycoprotein CD4.
    
 0.612
N307_10844
Receptor-type tyrosine-protein phosphatase C.
   
 
 0.611
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.