STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_03409Plexin-A2. (420 aa)    
Predicted Functional Partners:
N307_03408
Plexin-A2.
 
     0.916
N307_09316
Plexin-A4.
 
      0.900
N307_11311
Plexin-A1.
 
      0.899
N307_00575
Neuropilin; Belongs to the neuropilin family.
    
 0.823
N307_10500
Semaphorin-4D.
    
 0.779
N307_03123
E3 ubiquitin-protein ligase CBL.
    
 0.769
N307_10499
Uncharacterized protein.
    
 0.700
N307_14852
Semaphorin-3B.
    
 0.674
N307_09627
Semaphorin-4B.
    
 0.667
N307_02390
Semaphorin-3E.
    
 0.658
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.