STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_09565DTW domain-containing protein 1. (305 aa)    
Predicted Functional Partners:
N307_09564
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
 
      0.742
N307_03887
Coiled-coil domain-containing protein 85C.
      
 0.573
N307_06537
U3 small nucleolar ribonucleoprotein MPP10.
      
 0.565
N307_04427
MKI67 FHA domain-interacting nucleolar phosphoprotein-like.
      
 0.565
N307_10614
DTW domain-containing protein 2.
      
 0.559
N307_05898
Ribosome biogenesis protein TSR3.
      
 0.558
N307_05654
tRNA-dihydrouridine(20) synthase [NAD(P)+]-like.
      
 0.554
N307_06842
Putative rRNA-processing protein EBP2.
      
 0.507
N307_10154
tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like.
      
 0.505
N307_07825
Signal peptidase complex subunit 1.
      
 0.412
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.