STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_09342Transket_pyr domain-containing protein. (920 aa)    
Predicted Functional Partners:
N307_11576
Lipoyl-binding domain-containing protein.
 0.993
N307_10159
Dihydrolipoyl dehydrogenase.
  
 0.976
N307_12968
CoA_binding domain-containing protein; Belongs to the succinate/malate CoA ligase alpha subunit family.
 
 0.974
N307_03109
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
 
 0.960
N307_06846
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 0.958
N307_09664
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 0.955
N307_14206
Succinate-CoA ligase subunit beta.
 
 0.949
N307_11230
Succinate-CoA ligase subunit beta.
 
 0.949
N307_13024
Uncharacterized protein.
  
 0.921
N307_11319
Succinate dehydrogenase (quinone); Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
 
 0.921
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.