STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_09359Histone-lysine N-methyltransferase SUV39H2. (401 aa)    
Predicted Functional Partners:
N307_00317
Chromodomain Y-like 2.
   
 0.971
N307_04798
Chromodomain Y-like.
   
 0.971
N307_00661
Eukaryotic translation initiation factor 2 subunit 3.
  
  0.961
N307_12120
Chromobox protein 1.
   
0.955
N307_09446
Chromobox protein 3.
   
0.955
N307_03992
Histone-lysine N-methyltransferase SETDB1.
    
 0.928
N307_05735
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
    
 0.917
N307_07022
Histone-lysine N-methyltransferase SUV420H1.
   
 
 0.917
N307_09192
DNA damage-binding protein 1.
    
 
 0.904
N307_11917
Histone-lysine N-methyltransferase 2E.
    
 0.904
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.