STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_15017Liprin-alpha-1. (1259 aa)    
Predicted Functional Partners:
N307_02043
Peripheral plasma membrane protein CASK.
    
 0.992
N307_06402
Liprin-beta-1.
   
0.944
N307_07915
Liprin-beta-2.
   
0.921
N307_14636
Regulating synaptic membrane exocytosis protein 3.
    
 0.872
N307_12512
55 kDa erythrocyte membrane protein.
    
 0.868
N307_07415
ARF GTPase-activating protein GIT1.
    
 
 0.853
N307_00961
ARF GTPase-activating protein GIT2.
    
 
 0.853
N307_14148
RIMS-binding protein 2.
     
 0.846
N307_07862
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
   
 
  0.822
N307_08399
Receptor-type tyrosine-protein phosphatase S.
    
 0.803
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.