STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_11778Lysine-specific demethylase PHF2. (1048 aa)    
Predicted Functional Partners:
N307_10068
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.880
N307_13146
Histone H3.3.
    
 0.845
N307_10437
Histone H3.3C.
    
 0.845
N307_06725
Histone H3; Belongs to the histone H3 family.
    
 0.845
N307_09359
Histone-lysine N-methyltransferase SUV39H2.
    
 0.836
N307_06724
Histone H3.
    
 0.833
N307_06738
Uncharacterized protein.
    
 0.806
N307_06741
Uncharacterized protein.
    
 0.806
N307_06745
Uncharacterized protein.
    
 0.806
N307_06726
Uncharacterized protein.
    
 0.806
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.