STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_14307Serine/threonine-protein kinase PAK 3. (89 aa)    
Predicted Functional Partners:
N307_02992
Intersectin-2.
    
 0.969
N307_00770
Cell division control protein 42.
   
 0.825
N307_09159
Cytoplasmic protein.
    
 0.741
N307_07220
Rho guanine nucleotide exchange factor 7.
    
 0.700
N307_05359
Rho guanine nucleotide exchange factor 6.
    
 0.700
N307_03571
Unconventional myosin-IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.671
N307_10796
Unconventional myosin-IXa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.671
N307_00631
Guanine nucleotide-binding protein subunit beta-5.
    
 0.630
N307_12706
Intersectin-1.
    
 0.621
N307_15429
Signal transducing adapter molecule 2.
   
 0.609
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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