STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_025575,6-dihydroxyindole-2-carboxylic acid oxidase. (452 aa)    
Predicted Functional Partners:
N307_09396
Tyrosinase.
  
0.958
N307_01562
Aspartate aminotransferase.
    
 0.846
N307_08736
Aspartate aminotransferase.
    
  0.844
N307_12957
Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.
     
 0.826
N307_03626
Melanocyte-stimulating hormone receptor; Receptor for MSH (alpha, beta and gamma) and ACTH. The activity of this receptor is mediated by G proteins which activate adenylate cyclase; Belongs to the G-protein coupled receptor 1 family.
    
 0.755
N307_09577
Histidine decarboxylase.
    
  0.747
N307_13960
Aromatic-L-amino-acid decarboxylase.
    
  0.747
N307_15071
Melanoma antigen recognized by T-cells 1.
   
  
 0.716
N307_09821
Histone H2A deubiquitinase MYSM1.
    
 0.628
N307_15521
P protein.
   
  
 0.621
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.