STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_13230Mitoferrin-1; Belongs to the mitochondrial carrier (TC 2.A.29) family. (327 aa)    
Predicted Functional Partners:
N307_07783
AA_TRNA_LIGASE_II domain-containing protein.
 
   
  0.937
N307_01346
RBR-type E3 ubiquitin transferase.
 
      0.661
N307_05313
Uncharacterized protein.
    
 
 0.658
N307_08996
Magnesium transporter.
    
 
 0.518
N307_10201
Uncharacterized protein.
    
 
 0.475
N307_04390
Natural resistance-associated macrophage protein 1.
      
 0.422
N307_10729
Aminotran_5 domain-containing protein.
      
 0.418
N307_00942
NifU_N domain-containing protein.
   
  
 0.416
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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