STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_00656Peroxiredoxin-4. (176 aa)    
Predicted Functional Partners:
N307_11489
Thioredoxin domain-containing protein 5; Belongs to the protein disulfide isomerase family.
  
 0.965
N307_06769
Protein disulfide-isomerase A6; Belongs to the protein disulfide isomerase family.
  
 0.938
N307_15460
Endoplasmic reticulum resident protein 44.
  
 0.935
N307_02845
Sulfiredoxin-1.
   
 0.913
N307_13891
Thioredoxin domain-containing protein 3.
  
 0.911
N307_12289
Thioredoxin.
  
 0.910
N307_08563
Thioredoxin domain-containing protein 6.
  
 0.858
N307_05156
Thioredoxin domain-containing protein.
  
 0.831
N307_13535
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.818
N307_03740
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.762
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.