STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_13146Histone H3.3. (124 aa)    
Predicted Functional Partners:
N307_02051
Lysine-specific demethylase 6A.
   
 0.966
N307_09069
Histone H2B type 1-F/J/L; Belongs to the histone H2B family.
 
 
 0.935
N307_10175
Histone H2B; Belongs to the histone H2B family.
 
 
 0.933
N307_06729
Histone H2B; Belongs to the histone H2B family.
 
 
 0.933
N307_06761
Histone H2B; Belongs to the histone H2B family.
 
 
 0.933
N307_06721
Histone H2B; Belongs to the histone H2B family.
 
 
 0.933
N307_06755
Histone H2B 5; Belongs to the histone H2B family.
 
 
 0.931
N307_04610
AT-rich interactive domain-containing protein 4B.
   
 0.890
N307_08484
AT-rich interactive domain-containing protein 4A.
   
 0.890
N307_04996
Histone H2A; Belongs to the histone H2A family.
 
 
 0.884
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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