STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_13684Glutamate receptor ionotropic, kainate 2. (871 aa)    
Predicted Functional Partners:
N307_14382
Glutamate receptor ionotropic, kainate 4.
  
 
0.879
N307_07533
Glutamate receptor ionotropic, NMDA 1.
   
0.638
N307_02141
Disks large 3.
   
 0.582
N307_12118
Disks large 2.
   
 0.582
N307_00299
Disks large 1.
   
 0.582
N307_14569
Uncharacterized protein.
   
 0.582
N307_08115
Glutamate receptor ionotropic, NMDA 2A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
   
0.544
N307_05036
Glutamate receptor ionotropic, NMDA 2B.
   
0.541
N307_03825
Glutamate receptor 2.
  
0.531
N307_15053
Glutamate receptor ionotropic, NMDA 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
0.519
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.