STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_03247Hermansky-Pudlak syndrome 3 protein. (980 aa)    
Predicted Functional Partners:
N307_08765
Hermansky-Pudlak syndrome 6 protein.
   
 
 0.726
N307_09242
Hermansky-Pudlak syndrome 5 protein homolog; May regulate the synthesis and function of lysosomes and of highly specialized organelles, such as melanosomes and platelet dense granules.
   
 
 0.676
N307_00970
Hermansky-Pudlak syndrome 4 protein.
      
 0.574
N307_11488
Biogenesis of lysosome-related organelles complex 1 subunit 5; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO).
      
 0.570
N307_09568
Biogenesis of lysosome-related organelles complex 1 subunit 6.
      
 0.569
N307_08738
Hermansky-Pudlak syndrome 1 protein.
      
 0.565
N307_03863
Tectonin beta-propeller repeat-containing protein 2.
   
 
 0.523
N307_09802
Centrosomal protein of 290 kDa.
      
 0.513
N307_05616
Vesicle-associated membrane protein 7; Belongs to the synaptobrevin family.
      
 0.443
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.