STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_10309Cytochrome c oxidase subunit 6C. (67 aa)    
Predicted Functional Partners:
N307_15382
Uncharacterized protein.
   
 0.999
N307_04615
Cytochrome c oxidase assembly factor 6.
   
 0.999
N307_03670
Uncharacterized protein.
   
 0.999
N307_06481
Uncharacterized protein.
   
 0.999
N307_04997
Uncharacterized protein.
   
 0.999
N307_00979
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.999
N307_10207
Uncharacterized protein.
   
 0.997
N307_08604
Uncharacterized protein.
   
 0.995
N307_00744
Cytochrome b-c1 complex subunit 8.
   
 0.994
N307_04784
UCR_hinge domain-containing protein.
   
 0.991
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.