STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_01736Checkpoint protein HUS1. (266 aa)    
Predicted Functional Partners:
N307_03372
Cell cycle checkpoint protein RAD1.
    
 0.999
N307_08902
Cell cycle checkpoint protein RAD17.
   
 0.995
N307_13556
Cell cycle checkpoint control protein RAD9A.
    
 0.990
N307_00913
Cell cycle checkpoint control protein RAD9B.
    
 0.990
N307_05278
Replication factor C subunit 4.
   
 0.989
N307_08292
Replication factor C subunit 2.
    
 0.986
N307_09659
Replication factor C subunit 3.
    
 0.985
N307_01017
Replication factor C subunit 5.
   
 0.980
N307_08143
Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family.
   
 0.968
N307_08928
RAD9, HUS1, RAD1-interacting nuclear orphan protein 1.
    
 0.932
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.