STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_07940Zinc finger protein 516. (1153 aa)    
Predicted Functional Partners:
N307_07134
Lysine-specific histone demethylase 1A.
    
 0.944
N307_09778
Lysine-specific histone demethylase 1B.
    
  0.855
N307_01084
Adenylate kinase 9; Belongs to the adenylate kinase family.
    
  0.839
N307_01083
Adenylate kinase 9.
    
  0.839
N307_06558
PR domain zinc finger protein 16.
    
0.793
N307_06557
PR domain zinc finger protein 16.
    
 0.793
N307_03237
MDS1 and EVI1 complex locus protein MDS1.
    
 0.793
N307_03861
REST corepressor 1.
    
 0.707
N307_08680
C-terminal-binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 
 0.669
N307_11450
C-terminal-binding protein 2; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 
 0.669
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.