STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_01802Catenin beta-1. (777 aa)    
Predicted Functional Partners:
N307_08774
F-box/WD repeat-containing protein 1A.
    
 0.998
N307_06789
Lymphoid enhancer-binding factor 1.
    
 0.996
N307_01460
Beta-catenin-interacting protein 1.
    
 0.996
N307_00270
Adenomatous polyposis coli protein.
   
 0.994
N307_08843
Transcription factor 7-like 2.
    
 0.993
N307_11393
Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.
    
 0.991
N307_13277
CREB-binding protein.
    
 0.989
N307_11939
Transcription factor E2-alpha.
    
 0.987
N307_10068
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.986
N307_12908
Axin-2.
   
 0.977
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.