STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_14948Tudor domain-containing protein 12. (105 aa)    
Predicted Functional Partners:
N307_14947
Tudor domain-containing protein 12.
 
      0.899
N307_12067
Pescadillo.
   
 0.882
N307_06842
Putative rRNA-processing protein EBP2.
   
 0.809
N307_08534
Splicing factor 3B subunit 1.
   
 0.787
N307_07827
Guanine nucleotide-binding protein-like 3.
  
 0.786
N307_13071
THO complex subunit 4.
   
 0.775
N307_07755
Nucleolar protein 58.
  
 
 0.772
N307_04149
Ribosome biogenesis protein WDR12.
   
 0.752
N307_15389
Enhancer of mRNA-decapping protein 3.
  
 0.750
N307_03936
Pre-mRNA-processing factor 6.
    
 0.747
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.