STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_15183Uncharacterized protein. (48 aa)    
Predicted Functional Partners:
N307_02243
Mitotic checkpoint serine/threonine-protein kinase BUB1.
   
 0.983
N307_13531
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.
   
 0.982
N307_14764
Kinetochore-associated protein NSL1.
   
 0.974
N307_12242
Protein MIS12.
    
 0.960
N307_03845
DNA repair protein XRCC3.
   
 0.941
N307_08256
Kinetochore-associated protein DSN1.
   
 0.936
N307_04120
Fanconi anemia group M protein.
   
 0.926
N307_04709
Kinetochore protein Nuf2.
   
 0.913
N307_15399
Kinetochore protein NDC80.
   
 0.910
N307_06368
DNA repair protein XRCC2.
   
 0.882
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.