STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_07600Plasminogen activator; Belongs to the peptidase S1 family. (566 aa)    
Predicted Functional Partners:
N307_12071
Ig lambda chain V-1 region.
    
  0.931
N307_06246
Ig heavy chain V-III region VH26.
    
  0.911
N307_10674
T-cell surface glycoprotein CD4.
    
 0.866
N307_04073
Hepatocyte growth factor receptor.
    
 0.856
N307_03728
Plasminogen; Belongs to the peptidase S1 family.
  
  
0.853
N307_03729
Plasminogen; Belongs to the peptidase S1 family.
  
  
0.852
N307_14970
Protein S100-A10.
   
 0.846
N307_02536
Glia-derived nexin; Belongs to the serpin family.
  
 0.835
N307_07372
Alpha-2-antiplasmin; Belongs to the serpin family.
   
 0.819
N307_12076
Ig lambda chain V-1 region.
    
  0.792
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.