STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_04455Contactin-5. (200 aa)    
Predicted Functional Partners:
N307_02402
Contactin-5.
 
     0.922
N307_00396
Neuronal cell adhesion molecule.
   
0.762
N307_09925
Neural cell adhesion molecule L1-like.
   
0.762
N307_08700
Neurofascin.
    
0.760
N307_02612
Amyloid-like 2.
   
 
 0.683
N307_03950
Receptor-type tyrosine-protein phosphatase zeta.
   
 0.595
N307_00786
Contactin-associated protein-like 2.
   
 0.589
N307_03101
Neural cell adhesion molecule 1.
   
0.575
N307_00347
Neural cell adhesion molecule 2.
   
0.575
N307_00787
Contactin-associated protein-like 2.
   
 0.574
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.