STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_10831Ankyrin repeat family A protein 2. (313 aa)    
Predicted Functional Partners:
N307_06508
DNA-binding protein RFX7.
    
 
 0.925
N307_01634
Low-density lipoprotein receptor-related protein 4.
    
 0.733
N307_07547
Low-density lipoprotein receptor-related protein 2.
    
 0.733
N307_03784
Low-density lipoprotein receptor-related protein 4.
    
 0.733
N307_13418
Histone deacetylase 10.
   
 0.663
N307_12883
Histone deacetylase 9.
   
 0.663
N307_12019
Histone deacetylase 4.
   
 0.663
N307_01199
DNA-binding protein Rfx5.
    
 0.646
N307_15198
DNA-binding protein RFX2.
    
 0.608
N307_09137
DNA-binding protein RFX8.
    
 0.608
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.