STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_07336TPR_REGION domain-containing protein. (289 aa)    
Predicted Functional Partners:
N307_09541
RNA polymerase-associated protein LEO1.
    
 0.931
N307_15440
Ly6/PLAUR domain-containing protein 6B.
   
 0.835
N307_15439
Ly6/PLAUR domain-containing protein 6.
   
 0.835
N307_15441
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.835
N307_10774
Parafibromin.
    
 0.747
N307_07244
Cell division cycle protein 16.
    
 0.746
N307_10583
Anaphase-promoting complex subunit 2; Belongs to the cullin family.
    
 0.731
N307_01084
Adenylate kinase 9; Belongs to the adenylate kinase family.
   
  0.725
N307_01083
Adenylate kinase 9.
   
  0.725
N307_03311
Hyaluronan synthase 2.
  
 0.719
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.