STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_11667EH domain-containing protein 4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (463 aa)    
Predicted Functional Partners:
N307_02271
Rabenosyn-5.
    
 0.918
N307_06123
WD repeat-and FYVE domain-containing protein 4.
     
 0.846
N307_13856
Rab11 family-interacting protein 2.
    
 0.821
N307_05122
MICAL-like 1.
    
 
 0.808
N307_13991
Rab11 family-interacting protein 5.
     
 0.749
N307_14802
AP-2 complex subunit alpha-2.
    
  0.749
N307_01023
AP-1 complex subunit beta-1.
     
 0.748
N307_05123
Eukaryotic translation initiation factor 3 subunit L.
    
 
 0.690
N307_14156
Clathrin heavy chain 1.
    
 0.678
N307_14062
Clathrin heavy chain 1.
    
 0.678
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.