STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_02246Tyrosine-protein kinase Mer. (930 aa)    
Predicted Functional Partners:
N307_07242
Growth arrest-specific protein 6.
    
 0.938
N307_06958
GRB2-associated-binding protein 1.
    
 0.869
N307_09560
SHC-transforming protein 4.
    
 0.865
N307_05096
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1.
   
 0.820
N307_02177
T-cell surface glycoprotein CD3 zeta chain.
   
 0.816
N307_09513
SHC-transforming protein 1.
    
 0.809
N307_01871
SHC-transforming protein 3.
    
 0.809
N307_14345
Vitamin K-dependent protein S.
     
 0.800
N307_03977
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.762
N307_03123
E3 ubiquitin-protein ligase CBL.
    
 0.748
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.