STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_02730DNA polymerase subunit gamma-1. (1170 aa)    
Predicted Functional Partners:
N307_12926
HGTP_anticodon domain-containing protein.
   
 
 0.971
N307_08781
SF4 helicase domain-containing protein.
   
 
 0.888
N307_02252
Ribonuclease H1.
    
 0.866
N307_02819
Glycine--tRNA ligase.
   
 
 0.830
N307_04120
Fanconi anemia group M protein.
   
 
 0.826
N307_08210
Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.
  
 0.792
N307_14840
Fanconi anemia group D2 protein.
   
 0.781
N307_10680
Triosephosphate isomerase.
    
 0.768
N307_00977
Uncharacterized protein.
    
 
 0.733
N307_02794
DNA repair protein RAD50.
  
 
 0.724
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.