STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_14929Programmed cell death protein 2-like. (341 aa)    
Predicted Functional Partners:
N307_11903
Protein arginine N-methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
 
 0.834
N307_07646
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.739
N307_07868
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.684
N307_07480
Zinc finger protein 277.
   
 
 0.650
N307_09724
Bystin.
   
  
 0.567
N307_03644
Polyadenylate-binding protein 2.
      
 0.519
N307_10365
RNA-binding protein PNO1.
   
  
 0.480
N307_07951
Protein arginine N-methyltransferase 8; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
 
 0.446
N307_09861
Transmembrane prostate androgen-induced protein.
   
 
 0.446
N307_14872
Low-density lipoprotein receptor class A domain-containing protein 4.
   
 
 0.446
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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