STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_12120Chromobox protein 1. (177 aa)    
Predicted Functional Partners:
N307_09359
Histone-lysine N-methyltransferase SUV39H2.
   
0.955
N307_10437
Histone H3.3C.
   
 0.872
N307_06725
Histone H3; Belongs to the histone H3 family.
   
 0.872
N307_13146
Histone H3.3.
   
 0.844
N307_08424
Histone-lysine N-methyltransferase SETMAR.
    
 0.838
N307_11682
Protein EMSY.
    
 
 0.837
N307_06724
Histone H3.
   
 0.832
N307_07157
MBT domain-containing protein 1.
    
 0.822
N307_05076
Lethal(3)malignant brain tumor-like 2.
    
 0.822
N307_02102
E3 ubiquitin-protein ligase TRIM33.
    
 0.812
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.