STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_00595CREB-regulated transcription coactivator 2. (178 aa)    
Predicted Functional Partners:
N307_13835
Cyclic AMP-dependent transcription factor ATF-1.
    
 0.981
N307_03115
Serine/threonine-protein kinase SIK2.
    
 0.948
N307_13277
CREB-binding protein.
   
 0.931
N307_05564
Serine/threonine-protein kinase SIK2.
    
 0.915
N307_02124
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit.
    
 0.892
N307_10488
Non-specific serine/threonine protein kinase.
    
 0.866
N307_10364
Calcineurin subunit B type 1.
    
 0.866
N307_09827
Non-specific serine/threonine protein kinase.
    
 0.864
N307_12538
Serine/threonine-protein kinase SIK3.
    
 0.850
N307_01295
Cyclic AMP-responsive element-binding protein 3-like 3; Belongs to the bZIP family.
     
 0.844
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.