STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_00617Macrophage mannose receptor 1. (719 aa)    
Predicted Functional Partners:
N307_14516
Macrophage mannose receptor 1.
 
      0.785
N307_07574
Collectin-12.
   
 
0.652
N307_12586
Tenascin-R.
   
 0.628
N307_02933
Tenascin-N.
   
 0.613
N307_13904
Lymphocyte-specific protein 1.
    
 0.610
N307_10505
Tyrosine-protein kinase.
    
 0.602
N307_11635
Thyroglobulin.
   
 0.596
N307_08922
Hyaluronan and proteoglycan link protein 1.
    
 0.592
N307_01016
Kinase suppressor of Ras 2.
    
  0.590
N307_10685
Tyrosine-protein phosphatase non-receptor type 6.
   
 0.583
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.