STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_12413Metalloendopeptidase. (1009 aa)    
Predicted Functional Partners:
N307_05268
Chordin.
   
 
 0.819
N307_05267
Chordin.
   
 
 0.819
N307_05448
Procollagen C-endopeptidase enhancer 2.
    
0.740
N307_08740
Lysyl oxidase 4.
    
 0.631
N307_12539
Apolipoprotein A-I.
   
 
  0.587
N307_05632
Growth/differentiation factor 8.
    
 
 0.573
N307_10934
Bone morphogenetic protein 4.
    
 
 0.536
N307_01123
Cubilin.
    
0.536
N307_05864
TGF_BETA_2 domain-containing protein.
    
 
 0.536
N307_09014
CUB domain-containing protein 2.
    
0.536
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.