STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_09296Ankyrin repeat domain-containing protein 16. (366 aa)    
Predicted Functional Partners:
N307_09297
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
 
  
 0.625
N307_00888
Intraflagellar transport protein 81.
    
 0.617
N307_02203
Myosin-IIIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.590
N307_15243
WD repeat-containing protein 90.
    
 0.584
N307_06463
Intraflagellar transport protein 88.
   
 0.567
N307_10939
Intraflagellar transport protein 80.
   
 0.565
N307_07603
Ankyrin-1.
 
  
  0.562
N307_05488
BRCA1-associated RING domain protein 1.
  
 
 0.561
N307_02913
Intraflagellar transport protein 52.
    
 0.561
N307_04039
Intraflagellar transport protein 172.
    
 0.559
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.