STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_09324Protein kinase C theta type. (577 aa)    
Predicted Functional Partners:
N307_07727
Caspase recruitment domain-containing protein 11.
   
 0.915
N307_05901
3-phosphoinositide-dependent protein kinase 1.
    
0.845
N307_07599
Inhibitor of nuclear factor kappa-B kinase subunit beta.
    
0.844
N307_14107
Mitogen-activated protein kinase.
    
 0.830
N307_01128
Inhibitor of nuclear factor kappa-B kinase subunit alpha.
    
0.829
N307_08296
Neutrophil cytosol factor 1.
   
 0.817
N307_05135
Caspase recruitment domain-containing protein 10.
    
 0.815
N307_13249
Protein kinase C beta type.
   
 0.814
N307_10685
Tyrosine-protein phosphatase non-receptor type 6.
   
 0.810
N307_05847
Proto-oncogene c-Rel.
   
 0.804
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.