STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_07437Peptidylprolyl isomerase. (272 aa)    
Predicted Functional Partners:
N307_03868
Heat shock protein HSP 90-alpha.
   
 0.878
N307_13278
Uncharacterized protein.
   
 0.823
N307_13840
CS domain-containing protein.
   
 0.784
N307_13921
Endoplasmin.
   
 0.736
N307_04069
Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.
   
 0.718
N307_00101
Putative helicase MOV-10.
   
 0.663
N307_05899
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.649
N307_03839
Putative ATP-dependent RNA helicase TDRD9.
  
 0.643
N307_03100
Tetratricopeptide repeat protein 12.
   
 0.628
N307_00975
Tetratricopeptide repeat protein 28.
   
 0.628
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.