STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_07264Ubiquitin-protein ligase E3A. (858 aa)    
Predicted Functional Partners:
N307_14102
Ubiquitin-conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.978
N307_01203
26S proteasome non-ATPase regulatory subunit 4.
    
 
 0.941
N307_01802
Catenin beta-1.
    
 0.891
N307_01741
Transcriptional repressor NF-X1.
     
 0.880
N307_00236
UV excision repair protein RAD23 B.
   
 0.856
N307_02111
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3.
    
  0.835
N307_04128
MAGUK p55 subfamily member 5; Belongs to the MAGUK family.
    
  0.833
N307_11044
Protein scribble.
 
  
 0.816
N307_11711
Leucine-rich repeat-containing protein 1.
 
  
 0.816
N307_04334
26S proteasome non-ATPase regulatory subunit 14.
    
 
 0.812
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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