STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_08437Thyroid receptor-interacting protein 11. (1962 aa)    
Predicted Functional Partners:
N307_14191
Intraflagellar transport protein 20.
   
 0.976
N307_01635
Cytoskeleton-associated protein 5.
   
 0.679
N307_07223
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
    
 
 0.679
N307_07425
Golgi SNAP receptor complex member 1.
   
 0.673
N307_15243
WD repeat-containing protein 90.
    
 0.672
N307_01146
ADP-ribosylation factor 4; Belongs to the small GTPase superfamily. Arf family.
   
 0.665
N307_11300
ADP-ribosylation factor-like 5B; Belongs to the small GTPase superfamily. Arf family.
   
 0.665
N307_11008
ADP-ribosylation factor-like 6; Belongs to the small GTPase superfamily. Arf family.
   
 0.665
N307_15431
ADP-ribosylation factor-like 5A; Belongs to the small GTPase superfamily. Arf family.
   
 0.665
N307_01679
Intraflagellar transport protein 57.
    
 0.652
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.